6R2G
Crystal structure of a single-chain protein mimetic of the gp41 NHR trimer in complex with the synthetic CHR peptide C34
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 27.201, 69.664, 95.836 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.852 - 1.900 |
R-factor | 0.1923 |
Rwork | 0.190 |
R-free | 0.23080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4r61 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.162 |
Data reduction software | XDS |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.850 | 19.850 | 1.940 |
High resolution limit [Å] | 1.900 | 8.910 | 1.900 |
Rmerge | 0.059 | 0.021 | 1.103 |
Rmeas | 0.066 | 0.024 | 1.226 |
Rpim | 0.029 | 0.011 | 0.528 |
Number of reflections | 15041 | 161 | 1014 |
<I/σ(I)> | 12.9 | ||
Completeness [%] | 99.8 | 90.5 | 100 |
Redundancy | 5.1 | 3.8 | 5.2 |
CC(1/2) | 0.999 | 1.000 | 0.684 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 20% PEG 4000, 100 mM MES |