6R2A
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD cocrystallized with succinylphosphonate phosphonoethyl ester (PESP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9393 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.480, 108.020, 120.530 |
Unit cell angles | 90.00, 103.55, 90.00 |
Refinement procedure
Resolution | 40.370 - 1.700 |
R-factor | 0.152 |
Rwork | 0.151 |
R-free | 0.16800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yid |
RMSD bond length | 0.010 |
RMSD bond angle | 0.930 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.370 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.065 | 0.458 |
Rpim | 0.042 | 0.327 |
Number of reflections | 232526 | 32854 |
<I/σ(I)> | 11.8 | 2.4 |
Completeness [%] | 98.6 | 95.7 |
Redundancy | 3.3 | |
CC(1/2) | 0.996 | 0.792 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 291 | 2% 2-methyl-2-propanol, 47% MPD |