6QUQ
Crystal structure of glutathionylated glycolytic glyceraldehyde-3- phosphate dehydrogenase from Arabidopsis thaliana (AtGAPC1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-05-15 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.26 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 77.365, 77.365, 406.814 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.657 - 2.993 |
R-factor | 0.2513 |
Rwork | 0.249 |
R-free | 0.30310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4z0h |
RMSD bond length | 0.010 |
RMSD bond angle | 1.402 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.660 | 3.160 |
High resolution limit [Å] | 2.990 | 2.990 |
Rmerge | 0.088 | 0.303 |
Rmeas | 0.091 | 0.311 |
Rpim | 0.021 | 0.070 |
Number of reflections | 15692 | 2155 |
<I/σ(I)> | 25.1 | 9.1 |
Completeness [%] | 99.7 | 98 |
Redundancy | 18.7 | 19.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 3.0 M (NH4)2SO4, 0.1 M Hepes-NaOH, 0.1 mM H2O2 and 1 mM GSH |