6QSN
Crystal structure of Yellow fever virus polymerase NS5A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-18 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 108.285, 142.114, 152.177 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.011 - 3.004 |
R-factor | 0.2232 |
Rwork | 0.221 |
R-free | 0.27060 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.524 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.011 | 3.110 |
High resolution limit [Å] | 3.004 | 3.004 |
Rpim | 0.081 | 0.687 |
Number of reflections | 47148 | |
<I/σ(I)> | 9.91 | |
Completeness [%] | 99.2 | |
Redundancy | 8.3 | |
CC(1/2) | 0.994 | 0.419 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 80 mM Tris pH=8.5, 1.92M (NH4)2SO4, 20% (v/v) glycerol |