6QMO
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289E and S308A mutations
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-08 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.207, 75.752, 93.960 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.182 - 1.870 |
R-factor | 0.1878 |
Rwork | 0.186 |
R-free | 0.22360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4b4l |
RMSD bond length | 0.008 |
RMSD bond angle | 0.833 |
Data reduction software | XDS |
Data scaling software | Aimless (CCP4i2 v 0.0.5) |
Phasing software | PHASER (1.9-1692) |
Refinement software | REFMAC (CCP4i2 v 0.0.5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.210 | 1.870 |
High resolution limit [Å] | 1.810 | 1.810 |
Rmerge | 0.123 | 1.100 |
Rmeas | 0.133 | 1.193 |
Rpim | 0.051 | 0.457 |
Number of reflections | 31119 | |
<I/σ(I)> | 9.3 | 1.5 |
Completeness [%] | 98.8 | 97.1 |
Redundancy | 6.6 | 6.6 |
CC(1/2) | 0.242 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292.15 | 20% PEG 3350, 0.2M magnesium formate |