6QGE
Galectin-3C in complex with a pair of enantiomeric ligands: S enantiomer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-3 |
Synchrotron site | MAX II |
Beamline | I911-3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.388, 57.814, 62.586 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.460 - 1.160 |
R-factor | 0.1274 |
Rwork | 0.126 |
R-free | 0.15620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zsj |
RMSD bond length | 0.010 |
RMSD bond angle | 1.116 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3247) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.460 | 1.200 |
High resolution limit [Å] | 1.160 | 1.160 |
Rmerge | 0.059 | 0.756 |
Rmeas | 0.065 | 0.903 |
Rpim | 0.027 | 0.487 |
Number of reflections | 46420 | 4567 |
<I/σ(I)> | 19.1 | 1.7 |
Completeness [%] | 99.9 | 99.6 |
Redundancy | 5.5 | 3.3 |
CC(1/2) | 0.999 | 0.618 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 295 | Hanging drop vapour diffusion: 28% (w/v) PEG 4000, Tris-HCl pH 7.5, 0.4 M NaSCN, 15 mM beta-mercaptoethanol. The drop volume was 2 microlitres and the protein solution:reservoir ratio was varied between 0.5:1, 1:1, and 2:1. The crystals were soaked in 10 mM of the ligand for 20 hours. |