6Q1Y
Crystal Structure of Enoyl-[acyl-carrier-protein] reductase from Mycobacterium avium with bound NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-11 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 95.320, 95.320, 139.590 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.275 - 1.650 |
R-factor | 0.1427 |
Rwork | 0.142 |
R-free | 0.16890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2H7I |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX ((dev_3584: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.275 | 41.275 | 1.690 |
High resolution limit [Å] | 1.650 | 7.380 | 1.650 |
Rmerge | 0.056 | 0.026 | 0.551 |
Rmeas | 0.058 | 0.027 | 0.570 |
Total number of observations | 803764 | ||
Number of reflections | 45632 | 601 | 3309 |
<I/σ(I)> | 32.41 | 69.13 | 4.99 |
Completeness [%] | 99.8 | 95.1 | 100 |
Redundancy | 17.614 | 14.872 | 14.892 |
CC(1/2) | 1.000 | 0.999 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 287 | MyavA.00170.a.B1.PS38585 @ 20.93 mg/mL, incubated with 5 mM NAD, mixed 0.4uL protein ligand complex + 0.4uL JCSG+ (D10): 40% (v/v) PEG300, 100 mM Sodium Cacodylate/ HCl pH 6.5, 200 mM Calcium acetate. Tray ID: 310540 D10, puck: ixz5-8 |