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6Q1Y

Crystal Structure of Enoyl-[acyl-carrier-protein] reductase from Mycobacterium avium with bound NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-07-11
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 62 2 2
Unit cell lengths95.320, 95.320, 139.590
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.275 - 1.650
R-factor0.1427
Rwork0.142
R-free0.16890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2H7I
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX ((dev_3584: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.27541.2751.690
High resolution limit [Å]1.6507.3801.650
Rmerge0.0560.0260.551
Rmeas0.0580.0270.570
Total number of observations803764
Number of reflections456326013309
<I/σ(I)>32.4169.134.99
Completeness [%]99.895.1100
Redundancy17.61414.87214.892
CC(1/2)1.0000.9990.982
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5287MyavA.00170.a.B1.PS38585 @ 20.93 mg/mL, incubated with 5 mM NAD, mixed 0.4uL protein ligand complex + 0.4uL JCSG+ (D10): 40% (v/v) PEG300, 100 mM Sodium Cacodylate/ HCl pH 6.5, 200 mM Calcium acetate. Tray ID: 310540 D10, puck: ixz5-8

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PDB entries from 2024-11-13

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