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6PTE

Crystal Structure of ILNAMITKI peptide bound to HLA-A2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0332
Spacegroup nameP 1
Unit cell lengths58.429, 84.106, 85.363
Unit cell angles90.01, 90.06, 90.02
Refinement procedure
Resolution41.822 - 1.901
R-factor0.162
Rwork0.159
R-free0.18550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tvh
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.8221.970
High resolution limit [Å]1.9011.901
Rmerge0.0960.290
Rmeas0.1140.350
Rpim0.0620.193
Number of reflections12362411774
<I/σ(I)>10.84.33
Completeness [%]96.792.6
Redundancy3.22.9
CC(1/2)0.9930.902
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529620% v/v PEG3350, 100 mM HEPES, pH 7.5

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