6PNP
Crystal structure of the splice insert-free neurexin-1 LNS2 domain in complex with neurexophilin-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-21 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97910 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 71.705, 60.983, 79.619 |
Unit cell angles | 90.00, 106.74, 90.00 |
Refinement procedure
Resolution | 45.600 - 1.940 |
R-factor | 0.2025 |
Rwork | 0.198 |
R-free | 0.24660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2h0b |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.600 | 2.010 |
High resolution limit [Å] | 1.940 | 1.940 |
Rmerge | 0.100 | 1.214 |
Rmeas | 0.104 | |
Rpim | 0.029 | 0.409 |
Number of reflections | 24370 | 1662 |
<I/σ(I)> | 14.05 | 1.29 |
Completeness [%] | 95.0 | 68.58 |
Redundancy | 13 | 9.1 |
CC(1/2) | 0.999 | 0.796 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 298 | 16% PEG 3350, 2% Tacsimate, and 0.1 M sodium citrate tribasic |