6PK8
Antibody scFv-M204 dimeric state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-02 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.600, 105.260, 176.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 90.410 - 2.910 |
R-factor | 0.1909 |
Rwork | 0.186 |
R-free | 0.23790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gs3 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.616 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 90.410 | 90.410 | 2.990 |
High resolution limit [Å] | 2.910 | 13.020 | 2.910 |
Rmerge | 0.171 | 0.043 | 0.975 |
Rmeas | 0.198 | 0.052 | 1.144 |
Number of reflections | 25041 | 331 | 1651 |
<I/σ(I)> | 6.67 | 18.04 | 1.17 |
Completeness [%] | 98.1 | 95.9 | 89.8 |
Redundancy | 3.73 | 3.266 | 3.475 |
CC(1/2) | 0.988 | 0.998 | 0.481 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.15 M Ammonium sulfate, 0.1 M MES pH 6.0, 15% PEG 4000 |