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6PH9

Crystal Structure of the Klebsiella pneumoniae LpxH-lipid X complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-14
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 32 2 1
Unit cell lengths105.990, 105.990, 52.570
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.895 - 1.920
R-factor0.1793
Rwork0.178
R-free0.19940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5k8k
RMSD bond length0.002
RMSD bond angle0.538
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.8951.989
High resolution limit [Å]1.9201.920
Number of reflections262622588
<I/σ(I)>33.03
Completeness [%]99.9
Redundancy19.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2934 mg/mL protein, 10 mM MES, pH 6.0, 100 mM NaCl, 0.5 mM DTT, 2.5% glycerol, 100mM calcium chloride dihydrate, 50mM HEPES, pH 7.0, 16.5% PEG 400

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