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6PGW

Crystal structure of zebrafish Protocadherin-19 EC3-6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-31
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97910
Spacegroup nameP 1 21 1
Unit cell lengths69.920, 58.896, 70.956
Unit cell angles90.00, 117.97, 90.00
Refinement procedure
Resolution50.000 - 3.000
R-factor0.21939
Rwork0.215
R-free0.29815
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5iu9
RMSD bond length0.015
RMSD bond angle1.474
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.050
High resolution limit [Å]3.0003.000
Rmerge0.0780.229
Rmeas0.1020.304
Rpim0.0660.198
Number of reflections10543411
<I/σ(I)>9.23.2
Completeness [%]86.280.3
Redundancy22
CC(1/2)0.917
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.9277100 mM HEPES, 55% MPD

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