6PE6
PANK3 complex structure with compound PZ-3022
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-03 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 97.800, 97.800, 69.284 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.133 - 1.600 |
R-factor | 0.191469990568 |
Rwork | 0.190 |
R-free | 0.22370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6b3v |
RMSD bond length | 0.007 |
RMSD bond angle | 0.995 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.630 |
High resolution limit [Å] | 1.600 | 4.340 | 1.600 |
Rmerge | 0.068 | 0.047 | 0.807 |
Rmeas | 0.072 | 0.050 | 0.869 |
Rpim | 0.024 | 0.017 | 0.317 |
Number of reflections | 50252 | 2685 | 2440 |
<I/σ(I)> | 30.7 | ||
Completeness [%] | 98.9 | 99.2 | 97.5 |
Redundancy | 9.2 | 8.8 | 7.1 |
CC(1/2) | 0.998 | 0.786 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 291.15 | PEG 4000, ammonium acetate, citrate |