6P9H
Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-10 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9787 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 72.591, 115.296, 88.273 |
Unit cell angles | 90.00, 100.12, 90.00 |
Refinement procedure
Resolution | 48.039 - 3.003 |
R-factor | 0.2073 |
Rwork | 0.206 |
R-free | 0.22500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rtl |
RMSD bond length | 0.002 |
RMSD bond angle | 0.519 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.040 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.069 | 0.316 |
Number of reflections | 28660 | 4141 |
<I/σ(I)> | 15.2 | |
Completeness [%] | 99.8 | |
Redundancy | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 0.1 M sodium citrate tribasic, pH 5.5, 16% PEG 8000 |