6P9D
Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase Y249F variant with FAD - Yellow fraction
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-11 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.100, 74.030, 77.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.010 - 1.329 |
R-factor | 0.1329 |
Rwork | 0.131 |
R-free | 0.16210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nye |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.950 | 1.377 |
High resolution limit [Å] | 1.329 | 1.329 |
Rmerge | 0.020 | 0.200 |
Number of reflections | 79369 | 7650 |
<I/σ(I)> | 17.19 | 3.6 |
Completeness [%] | 99.4 | 96.96 |
Redundancy | 2 | 2 |
CC(1/2) | 0.999 | 0.882 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.05 M Tris-Cl pH 7.0-7.3, 10% glycerol, and 12-13% (w/v) PEG 3350, 5-10% PEG 6000 |