Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P87

E.coli LpxD in complex with compound 5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2014-12-04
DetectorADSC QUANTUM 315r
Wavelength(s)1.000
Spacegroup nameP 32 2 1
Unit cell lengths97.213, 97.213, 216.185
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution84.189 - 1.900
R-factor0.1811
Rwork0.180
R-free0.20690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3eh0
Data reduction softwareXDS
Data scaling softwareSCALA (0.7.2)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3211)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]84.19084.1901.930
High resolution limit [Å]1.90010.4101.900
Rmerge0.0940.0191.238
Rmeas0.1020.0211.339
Rpim0.0370.0080.504
Total number of observations686750428232124
Number of reflections940466884602
<I/σ(I)>14.355.71.6
Completeness [%]100.099.6100
Redundancy7.36.27
CC(1/2)0.9991.0000.628
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72980.2M Mg formate, 20% PEG 3350

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon