6P6Y
Crystal structure of voltage-gated sodium channel NavAb V100C/Q150C disulfide crosslinked mutant in the activated state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 125.830, 125.830, 189.292 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.530 - 2.890 |
R-factor | 0.2172 |
Rwork | 0.214 |
R-free | 0.27317 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rvy |
RMSD bond length | 0.008 |
RMSD bond angle | 1.569 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.940 |
High resolution limit [Å] | 2.890 | 2.890 |
Rmerge | 0.125 | 0.649 |
Rmeas | 0.130 | 0.703 |
Rpim | 0.035 | 0.253 |
Number of reflections | 16988 | 638 |
<I/σ(I)> | 22.06 | 1.21 |
Completeness [%] | 97.9 | 76.2 |
Redundancy | 12.9 | 4.9 |
CC(1/2) | 1.000 | 0.831 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 277 | 1.8 M ammonium sulfate 0.1 M sodium citrate pH 4.8 |