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6P5X

Sirohydrochlorin-bound S. typhimurium siroheme synthase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-03-10
DetectorRAYONIX MX300-HS
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths60.061, 99.784, 145.463
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.380 - 1.970
R-factor0.1745
Rwork0.173
R-free0.22000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1pjt
RMSD bond length0.006
RMSD bond angle0.881
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.000
High resolution limit [Å]1.9701.970
Rmerge0.1030.582
Rpim0.0290.173
Number of reflections626573107
<I/σ(I)>604.2
Completeness [%]99.8
Redundancy14.5
CC(1/2)0.9930.917
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52984-14% PEG 4000, 100 mM 2-(N-morpholino)ethanesulfonic acid (MES) pH 5.0, 500mM sodium chloride, 7 mM 2-Mercaptoethanol (BME), microseeded

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PDB entries from 2024-07-10

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