6OS3
Crystal structure of native CymD prenyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-03-30 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.91950 |
Spacegroup name | I 4 |
Unit cell lengths | 157.690, 157.690, 56.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.750 - 1.700 |
R-factor | 0.1677 |
Rwork | 0.167 |
R-free | 0.20810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6os6 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 55.750 | 55.750 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.232 | 0.114 | 1.118 |
Rmeas | 0.240 | 0.118 | 1.154 |
Rpim | 0.060 | 0.029 | 0.284 |
Total number of observations | 1209693 | 9464 | 64095 |
Number of reflections | 76243 | 568 | 4005 |
<I/σ(I)> | 8 | 19.1 | 2.9 |
Completeness [%] | 99.9 | 99.8 | 100 |
Redundancy | 15.9 | 16.7 | 16 |
CC(1/2) | 0.994 | 0.993 | 0.742 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 4% 2-propanol, 0.1 M bis-tris propane (pH 9.0), 20% PEG monomethyl ether 5000 |