Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6OJV

Crystal structure of human thymidylate synthase delta(7-29) in complex with dUMP and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-06
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97915
Spacegroup nameC 1 2 1
Unit cell lengths154.950, 103.033, 109.211
Unit cell angles90.00, 128.92, 90.00
Refinement procedure
Resolution48.556 - 2.593
R-factor0.2417
Rwork0.240
R-free0.26880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1hzw
RMSD bond length0.002
RMSD bond angle0.511
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.750
High resolution limit [Å]2.5902.590
Number of reflections411556486
<I/σ(I)>12.751.44
Completeness [%]98.797.1
Redundancy6.66.4
CC(1/2)0.9960.807
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5295.15Well solution 5% PEG 8000, 40% MPD, and 0.1M Na cacodylate Drop ratio 1:1 Enzyme mix/well solution

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon