6OFI
CRYSTAL STRUCTURE OF the RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB IN COMPLEX WITH HIV-1 CLADE A/E GP120
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 90.644, 90.644, 408.994 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.430 - 3.850 |
R-factor | 0.274 |
Rwork | 0.271 |
R-free | 0.32600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6oed 3tgt |
RMSD bond length | 0.005 |
RMSD bond angle | 1.061 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.920 |
High resolution limit [Å] | 3.850 | 3.850 |
Rmerge | 0.249 | |
Rpim | 0.567 | |
Number of reflections | 8672 | 448 |
<I/σ(I)> | 4.7 | |
Completeness [%] | 81.7 | 89.6 |
Redundancy | 3.4 | 3.3 |
CC(1/2) | 0.449 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 294 | 15% PEG 6000, 0.1 M sodium citrate pH 5.5 |