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6O9O

Crystal Structure of SMYD3 with Potent and Selective Isoxazole Amide Inhibitor 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-07-27
DetectorRAYONIX MX-225
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths61.433, 66.636, 107.340
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.614 - 1.586
R-factor0.1737
Rwork0.172
R-free0.20020
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareDENZO
Data scaling softwareAimless (0.5.27)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]66.64066.6401.670
High resolution limit [Å]1.5865.0201.590
Rmerge0.0710.0370.572
Rmeas0.0770.0400.632
Rpim0.0290.0150.263
Number of reflections6018420948454
<I/σ(I)>15
Completeness [%]99.699.597.6
Redundancy6.96.65.5
CC(1/2)0.9990.9990.871
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP295Libro 24 well sitting drop tray. Reservoir solution: 10% PEG 3350, 0.2M MgOAc Drops composed of 2ul protein + 2 ul reservoir. Frozen seed stock added to ensure nucleation. Crystals should grow overnight at 22C and fully mature within 3 days Apo crystals were soaked with inhibitor as follows: 1ul 100mM compound + 1ul well buffer Add 0.3ul to the drop Incubate at room temperature

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