6O9C
Crystal structure of HLA-A3*01 in complex with a mutant beta-catenin peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-15 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.918394 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 155.123, 155.123, 85.316 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.780 - 2.450 |
R-factor | 0.216 |
Rwork | 0.214 |
R-free | 0.25900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6o9b |
RMSD bond length | 0.010 |
RMSD bond angle | 1.619 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.780 | 44.780 | 2.520 |
High resolution limit [Å] | 2.450 | 10.980 | 2.450 |
Rmerge | 0.172 | 0.050 | 1.396 |
Rmeas | 0.177 | 0.052 | 1.434 |
Total number of observations | 409173 | ||
Number of reflections | 22620 | 310 | 1632 |
<I/σ(I)> | 13.89 | 36.76 | 2.14 |
Completeness [%] | 99.9 | 95.7 | 99.7 |
Redundancy | 18.089 | 14.3 | 18.839 |
CC(1/2) | 0.998 | 0.999 | 0.767 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 292 | 0.1 M MES, pH 6.5, 0.2 M ammonium sulfate, 30% PEG5000 MME |