6O8D
Anti-CD28xCD3 CODV Fab bound to CD28
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 153.140, 60.139, 152.558 |
Unit cell angles | 90.00, 104.04, 90.00 |
Refinement procedure
Resolution | 73.972 - 3.547 |
R-factor | 0.2807 |
Rwork | 0.272 |
R-free | 0.35610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | CODV-Fab: 6O89 CD28: 1YJD |
Data reduction software | XDS |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 74.050 | 74.050 | 3.640 |
High resolution limit [Å] | 3.550 | 15.880 | 3.550 |
Rmerge | 0.192 | 0.109 | 0.717 |
Rmeas | 0.235 | 0.144 | 0.858 |
Rpim | 0.133 | 0.093 | 0.465 |
Total number of observations | 53137 | 535 | 3987 |
Number of reflections | 16611 | 211 | 1192 |
<I/σ(I)> | 4 | 9.8 | 1.5 |
Completeness [%] | 99.8 | 99.2 | 99.7 |
Redundancy | 3.2 | 2.5 | 3.3 |
CC(1/2) | 0.635 | 0.937 | 0.567 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 26% PEG3350, 0.75% myo-inositol, 0.263M potassium citrate tribasic monohydrate |