Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6O8D

Anti-CD28xCD3 CODV Fab bound to CD28

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2018-03-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9686
Spacegroup nameC 1 2 1
Unit cell lengths153.140, 60.139, 152.558
Unit cell angles90.00, 104.04, 90.00
Refinement procedure
Resolution73.972 - 3.547
R-factor0.2807
Rwork0.272
R-free0.35610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)CODV-Fab: 6O89 CD28: 1YJD
Data reduction softwareXDS
Data scaling softwareAimless (0.6.2)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]74.05074.0503.640
High resolution limit [Å]3.55015.8803.550
Rmerge0.1920.1090.717
Rmeas0.2350.1440.858
Rpim0.1330.0930.465
Total number of observations531375353987
Number of reflections166112111192
<I/σ(I)>49.81.5
Completeness [%]99.899.299.7
Redundancy3.22.53.3
CC(1/2)0.6350.9370.567
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27726% PEG3350, 0.75% myo-inositol, 0.263M potassium citrate tribasic monohydrate

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon