6O82
S. pombe ubiquitin E1 complex with a ubiquitin-AMP mimic
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-13 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 182.061, 114.616, 125.967 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.388 - 2.604 |
R-factor | 0.1985 |
Rwork | 0.197 |
R-free | 0.23030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3cmm |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3211) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.390 | 2.700 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.101 | 0.597 |
Rmeas | 0.109 | 0.645 |
Rpim | 0.041 | 0.242 |
Number of reflections | 81217 | 7917 |
<I/σ(I)> | 12.8 | |
Completeness [%] | 99.8 | 98.7 |
Redundancy | 7 | 7 |
CC(1/2) | 0.997 | 0.848 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 20% PEG 3350, 0.15 M MgSO4, 5 mM MgCl2, 1 mM pyrophosphate |