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6O5A

Crystal Structure of multi-drug resistant HIV-1 protease PR-S17 with a substrate analog p2-NC in P61

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-02-28
DetectorRAYONIX MX300-HS
Wavelength(s)1
Spacegroup nameP 61
Unit cell lengths63.833, 63.833, 83.039
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.220 - 1.670
R-factor0.17753
Rwork0.176
R-free0.21617
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1sgu
RMSD bond length0.019
RMSD bond angle2.238
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0222)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.730
High resolution limit [Å]1.6701.670
Rmerge0.0570.444
Rpim0.0290.340
Number of reflections219451989
<I/σ(I)>16.92
Completeness [%]98.489.2
Redundancy4.42.3
CC(1/2)0.641
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729835% TacsimateTM, pH 7.0 (Hampton Research Corp., Aliso Viejo, CA). Tacsimate contains 1.83 M malonic acid, 0.25 M ammonium citrate tribasic, 0.12 M succinic acid, 0.3 M DL-malic acid, 0.4 M sodium acetate trihydrate, 0.5 M sodium formate, and 0.16 M ammonium tartrate dibasic.

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