6O0W
Crystal structure of the TIR domain from the grapevine disease resistance protein RUN1 in complex with NADP+ and Bis-Tris
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 69.085, 79.399, 34.266 |
Unit cell angles | 90.00, 107.42, 90.00 |
Refinement procedure
Resolution | 39.700 - 1.750 |
R-factor | 0.17 |
Rwork | 0.167 |
R-free | 0.19500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.773 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((DEV_3357: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.700 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.078 | 0.636 |
Rmeas | 0.084 | 0.691 |
Rpim | 0.032 | 0.267 |
Number of reflections | 17742 | 899 |
<I/σ(I)> | 10.4 | 1.4 |
Completeness [%] | 99.6 | 93.3 |
Redundancy | 6.9 | 6.3 |
CC(1/2) | 0.997 | 0.869 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M NaCl, 0.1 M Bis-Tris pH 6.5, 25% w/v PEG 3350) and 10 mM NADP |