6NVB
Crystal structure of the inhibitor-free form of the serine protease kallikrein-4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-05 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 |
Unit cell lengths | 51.602, 65.723, 74.191 |
Unit cell angles | 79.01, 72.91, 77.62 |
Refinement procedure
Resolution | 35.800 - 1.636 |
Rwork | 0.154 |
R-free | 0.18030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k8y |
Data reduction software | XDS (Nov 1, 2016) |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX (1.14.3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.800 | 1.695 |
High resolution limit [Å] | 1.636 | 1.636 |
Rmerge | 0.063 | 0.687 |
Rmeas | 0.074 | 0.797 |
Rpim | 0.037 | 0.404 |
Number of reflections | 107669 | 10360 |
<I/σ(I)> | 17.81 | 2.09 |
Completeness [%] | 96.8 | 93.42 |
Redundancy | 3.9 | 3.8 |
CC(1/2) | 0.999 | 0.698 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 293 | 0.2M lithium sulfate, 0.1M sodium acetate, 22% PEG 8000 cryoprotectant = 1:1 glycerol : mother liquor |