6NRH
Crystal Structure of human PARP-1 ART domain bound inhibitor UTT63
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-08 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 93.503, 93.503, 137.948 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.780 - 1.500 |
R-factor | 0.1306 |
Rwork | 0.129 |
R-free | 0.15800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 6BHV |
RMSD bond length | 0.009 |
RMSD bond angle | 1.337 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.780 | 47.730 | 1.530 |
High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
Rmerge | 0.041 | 0.033 | 1.360 |
Rmeas | 0.041 | 0.034 | 1.408 |
Rpim | 0.008 | 0.007 | 0.360 |
Number of reflections | 49081 | 367 | 2356 |
<I/σ(I)> | 36.7 | ||
Completeness [%] | 100.0 | 99.7 | 99.4 |
Redundancy | 24.1 | 20.3 | 14.7 |
CC(1/2) | 1.000 | 1.000 | 0.783 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.5 | 298 | ~20% PEG 3350, 0.2 M ammonium sulfate or sodium citrate, 100 mM Hepes pH 7.5 |