Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NOJ

PD-L1 IgV domain V76T with fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2016-10-29
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1
Spacegroup nameP 21 21 2
Unit cell lengths83.803, 96.941, 32.658
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.084 - 2.330
R-factor0.1956
Rwork0.190
R-free0.24540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3bik
RMSD bond length0.011
RMSD bond angle1.259
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.390
High resolution limit [Å]2.3302.330
Rmerge0.0990.505
Rmeas0.1590.539
Rpim0.0510.183
Number of reflections16612803
<I/σ(I)>11.3
Completeness [%]99.599.9
Redundancy8.87.9
CC(1/2)0.675
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION2910.056 M sodium phosphate monobasic, 1.344 M potassium phosphate dibasic

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon