6NJZ
EphA2 LBD in complex with YSA-GSGSK-bio peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-03-09 |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.5418 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 44.775, 88.224, 153.414 |
Unit cell angles | 90.00, 90.79, 90.00 |
Refinement procedure
Resolution | 24.580 - 1.900 |
R-factor | 0.1712 |
Rwork | 0.169 |
R-free | 0.20690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hei |
Data reduction software | XDS (Jan 26, 2018) |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.14rc2_3191) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.980 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 44891 | 2943 |
<I/σ(I)> | 10.9 | 1.4 |
Completeness [%] | 95.7 | 93 |
Redundancy | 2.8 | 2.8 |
CC(1/2) | 0.999 | 0.672 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.09M BIS-TRIS pH5.5, 22.5% w/v PEG 3,350, 3% w/v 6-aminohexanoic acid |