6N54
Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidocytidine monophosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 198 |
Detector technology | CCD |
Collection date | 2018-04-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | F 2 2 2 |
Unit cell lengths | 90.329, 141.263, 247.887 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.583 - 2.424 |
R-factor | 0.1914 |
Rwork | 0.189 |
R-free | 0.22730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1uei |
RMSD bond length | 0.003 |
RMSD bond angle | 0.517 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmeas | 0.105 | |
Rpim | 0.040 | 0.437 |
Number of reflections | 29839 | 1456 |
<I/σ(I)> | 31.9 | 1.66 |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 7 | 6.5 |
CC(1/2) | 0.999 | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.2 M Na/K phosphate, 20% PEG 3350 |