6MO0
Structure of dengue virus protease with an allosteric Inhibitor that blocks replication
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-25 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 109.108, 109.108, 75.848 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.130 - 2.700 |
R-factor | 0.25881 |
Rwork | 0.256 |
R-free | 0.31055 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fom |
RMSD bond length | 0.013 |
RMSD bond angle | 1.493 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.395 | 2.036 |
Number of reflections | 14589 | 1435 |
<I/σ(I)> | 15.29 | 2.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 4.9 | 8.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 35% PEG 200, 100 mM MES, pH 8.5 |