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6ML8

Crystal structure of hemagglutinin from H1N1 Influenza A virus A/Denver/57 bound to the C05 antibody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2018-07-26
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 3 2 1
Unit cell lengths118.460, 118.460, 162.440
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.886 - 2.920
R-factor0.2045
Rwork0.201
R-free0.26420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4edb 4fnl
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.14_3219)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.88647.8863.000
High resolution limit [Å]2.92013.0602.920
Rmerge0.1070.0240.977
Rmeas0.1160.0261.050
Number of reflections292123682117
<I/σ(I)>15.2343.862
Completeness [%]99.994.1100
Redundancy7.3245.7347.556
CC(1/2)0.9980.9990.726
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5287InvbJ.18715.a.KN11/HosaA.20194.a.TC11 batch PD39296/PD38299 at a combined complex 10 mg/mL against PACT screen condition G9: 0.2 M potassium/sodium tartrate, 0.1 M BisTris Propane pH 7.5, 20% PEG 3350 supplemented with 20% ethylene glycol as cryo-protectant, crystal tracking ID 300847g9, unique puck ID sto6-4

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