6MIM
Crystal structure of AF9 YEATS domain Y78W mutant in complex with histone H3K9cr
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2017-08-17 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.159, 59.697, 155.395 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.338 - 2.525 |
R-factor | 0.209 |
Rwork | 0.203 |
R-free | 0.26370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tmp |
RMSD bond length | 0.012 |
RMSD bond angle | 1.353 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.620 |
High resolution limit [Å] | 2.520 | 2.530 |
Number of reflections | 13056 | |
<I/σ(I)> | 33.5 | |
Completeness [%] | 94.3 | |
Redundancy | 10.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 100 mM MES pH 6.0, 20%(w/v) PEG 6000, and 10 mM ZnCl2 |