6MHA
dHP1 Chromodomain Y24W variant bound to histone H3 peptide containing trimethyllysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-19 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 34.007, 76.695, 76.508 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.347 - 1.497 |
R-factor | 0.1968 |
Rwork | 0.194 |
R-free | 0.21890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kne |
RMSD bond length | 0.006 |
RMSD bond angle | 0.804 |
Data reduction software | KYLIN |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.347 | 38.347 | 1.590 |
High resolution limit [Å] | 1.490 | 4.480 | 1.550 |
Rmerge | 0.038 | 0.039 | 0.312 |
Rmeas | 0.045 | 0.046 | 0.382 |
Number of reflections | 30131 | 1156 | 4101 |
<I/σ(I)> | 19.79 | 38.07 | 2.95 |
Completeness [%] | 96.7 | 98.7 | 81.6 |
Redundancy | 3.533 | 3.503 | 2.469 |
CC(1/2) | 0.997 | 0.995 | 0.906 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 3.2 M Ammonium sulfate, 0.1 M MES |