6MBE
Human Mcl-1 in complex with the designed peptide dM7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | OTHER |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-01-12 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 80.758, 80.758, 57.950 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.940 - 2.250 |
R-factor | 0.1951 |
Rwork | 0.192 |
R-free | 0.22110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pk1 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.290 |
High resolution limit [Å] | 2.250 | 6.100 | 2.250 |
Rmerge | 0.137 | 0.073 | 0.604 |
Rmeas | 0.140 | 0.075 | 0.699 |
Rpim | 0.031 | 0.017 | 0.337 |
Number of reflections | 10429 | 588 | 385 |
<I/σ(I)> | 5 | ||
Completeness [%] | 97.3 | 99 | 73.8 |
Redundancy | 17.6 | 19.4 | 3 |
CC(1/2) | 0.999 | 0.708 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 1.4 M sodium citrate pH 6.5, 0.1 M HEPES pH 7.5 |