6M72
Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-21 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.95372 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 192.029, 37.090, 44.650 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.650 - 1.600 |
R-factor | 0.2027 |
Rwork | 0.201 |
R-free | 0.24480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gg5 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.851 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.490 | 5.060 | 1.690 |
High resolution limit [Å] | 1.600 | 3.580 | 1.600 |
Rmerge | 0.127 | 0.546 | |
Rmeas | 0.167 | 0.142 | 0.613 |
Rpim | 0.073 | 0.062 | 0.270 |
Number of reflections | 42971 | 2543 | 6201 |
<I/σ(I)> | 5.7 | 4.2 | 1.3 |
Completeness [%] | 99.4 | 97.6 | 100 |
Redundancy | 4.9 | 4.9 | 4.9 |
CC(1/2) | 0.983 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 4.6 | 298 | 0.2 M ammonium acetate, 0.1 M sodium acetate trihydrate, 30% w/v PEG 4000 |