6M0Z
X-ray structure of Drosophila dopamine transporter with NET-like mutations (D121G/S426M/F471L) in L-norepinephrine bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 97.292, 142.801, 168.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.610 - 2.880 |
R-factor | 0.2147 |
Rwork | 0.213 |
R-free | 0.24340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xp1 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.650 | 48.650 | 2.960 |
High resolution limit [Å] | 2.876 | 12.200 | 2.880 |
Rmerge | 0.106 | 0.036 | 2.424 |
Rmeas | 0.114 | 0.039 | 2.609 |
Rpim | 0.041 | 0.015 | 0.952 |
Total number of observations | 4742 | 31970 | |
Number of reflections | 54014 | 768 | 4363 |
<I/σ(I)> | 12.7 | 44.3 | 0.9 |
Completeness [%] | 99.9 | 95.6 | 100 |
Redundancy | 7.4 | 6.2 | 7.3 |
CC(1/2) | 0.999 | 0.999 | 0.370 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 0.1M MOPS pH7.0, 32% PEG 600 |