6LIM
BRD4-BD1 bound with compound 40
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-06-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9723 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.808, 45.972, 77.494 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.320 - 1.759 |
R-factor | 0.195640865434 |
Rwork | 0.191 |
R-free | 0.23512 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xhy |
RMSD bond length | 0.010 |
RMSD bond angle | 1.099 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.11_2567) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.540 | 1.850 |
High resolution limit [Å] | 1.759 | 1.759 |
Rmerge | 0.184 | |
Number of reflections | 25039 | 1666 |
<I/σ(I)> | 11.7 | |
Completeness [%] | 97.5 | |
Redundancy | 10.7 | |
CC(1/2) | 0.982 | 0.628 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 289 | 10mg/ml, 2.8-3.8M sodium formate, glycerol 10% |