6LH1
Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter trapped in an outward-facing conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 43.366, 77.005, 193.114 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.279 - 2.861 |
R-factor | 0.2303 |
Rwork | 0.229 |
R-free | 0.26440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4n7x |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.279 | 48.278 | 2.901 |
High resolution limit [Å] | 2.851 | 8.041 | 2.851 |
Rmerge | 0.145 | 0.046 | 0.724 |
Rmeas | 0.171 | 0.055 | 0.847 |
Rpim | 0.087 | 0.030 | 0.428 |
Total number of observations | 27463 | 1221 | 1439 |
Number of reflections | 7621 | 381 | 382 |
<I/σ(I)> | 7.6 | 20.6 | 1.8 |
Completeness [%] | 96.1 | 93.6 | 97.7 |
Redundancy | 3.6 | 3.2 | 3.8 |
CC(1/2) | 0.991 | 0.996 | 0.709 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5 | 293.15 | 0.2 M NH4H2PO4, 0.1 M (NH4)2SO4, 0.1 M Na+-citrate pH 5.0, 34% PEG 400, 4% 1,3-Butanediol |