6LD1
Zika NS5 polymerase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-16 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.9999 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.030, 82.890, 69.430 |
Unit cell angles | 90.00, 114.52, 90.00 |
Refinement procedure
Resolution | 19.690 - 1.400 |
R-factor | 0.1973 |
Rwork | 0.196 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tfr |
RMSD bond length | 0.008 |
RMSD bond angle | 0.900 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.3 (3-OCT-2019)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.690 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.054 | 1.700 |
Number of reflections | 126423 | 12347 |
<I/σ(I)> | 15.95 | 0.93 |
Completeness [%] | 97.5 | |
Redundancy | 6.9 | |
CC(1/2) | 0.990 | 0.433 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 293 | 10% PEG 6000, 0.2M HEPES pH 7.5 |