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6L5Z

Crystal strucutre of AF9 YEATS domain in complex with a cyclopeptide inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2018-10-11
DetectorMAR CCD 130 mm
Wavelength(s)0.9791
Spacegroup nameP 32 2 1
Unit cell lengths106.240, 106.240, 45.492
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.780 - 3.050
R-factor0.1937
Rwork0.190
R-free0.22180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tmp
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.100
High resolution limit [Å]3.0508.2703.050
Rmerge0.0980.0490.800
Rmeas0.1030.0520.844
Rpim0.0330.0180.269
Total number of observations56564
Number of reflections5816320277
<I/σ(I)>6.4
Completeness [%]99.898.8100
Redundancy9.78.79.6
CC(1/2)0.9970.899
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27720% (w/v)PEG 3350,0.2M Ammonium Nitrate

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