6L4V
Turning an asparaginyl endopeptidase into a peptide ligase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-28 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000040 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 79.000, 133.800, 44.250 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.750 - 1.350 |
R-factor | 0.1751 |
Rwork | 0.174 |
R-free | 0.18880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5h0i |
RMSD bond length | 0.009 |
RMSD bond angle | 1.000 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.3 (3-OCT-2019)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.750 | 1.390 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmerge | 0.057 | 1.580 |
Number of reflections | 103635 | |
<I/σ(I)> | 14.16 | 0.9 |
Completeness [%] | 99.8 | |
Redundancy | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.2 | 298 | 0.1M Sodium formate; 0.1M Ammonium acetate; 0.1M Sodium citrate tribasic dihydrate; 0.1M Potassium sodium tartrate tetrahydrate; 0.1M Sodium oxamate 0.1M Sodium HEPES; 0.1M MOPS 10% v/v Ethylene glycol; 8 % w/v PEG 8000 |