6KYJ
Hybrid-Rubisco (rice RbcL and sorghum RbcS) in complex with sulfate ions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-18 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.0 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 223.790, 223.790, 108.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.580 - 1.700 |
R-factor | 0.1635 |
Rwork | 0.162 |
R-free | 0.18470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3axm |
RMSD bond length | 0.007 |
RMSD bond angle | 0.852 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.580 | 1.761 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.118 | 1.138 |
Rmeas | 0.121 | |
Rpim | 0.023 | 0.234 |
Number of reflections | 299765 | 29707 |
<I/σ(I)> | 23.31 | 3.13 |
Completeness [%] | 100.0 | |
Redundancy | 27.2 | |
CC(1/2) | 0.999 | 0.820 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.1M Tris-HCl (pH 9.0), 0.2M lithium sulfate, 15%(w/v) polyethylene glycol 4000, and 10 %(w/v) glycerol |