6KU3
Crystal structure of gibberellin 2-oxidase3 (GA2ox3)in rice
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-31 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 99.470, 112.739, 149.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.876 - 2.150 |
R-factor | 0.1992 |
Rwork | 0.197 |
R-free | 0.24310 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.190 |
High resolution limit [Å] | 2.150 | 5.830 | 2.150 |
Rmerge | 0.093 | 0.062 | 0.618 |
Rmeas | 0.104 | 0.071 | 0.689 |
Rpim | 0.047 | 0.034 | 0.303 |
Total number of observations | 456613 | ||
Number of reflections | 91795 | 4821 | 4540 |
<I/σ(I)> | 7.8 | ||
Completeness [%] | 99.9 | 98 | 100 |
Redundancy | 5 | 4.4 | 4.9 |
CC(1/2) | 0.993 | 0.783 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M ammonium sulfate, 0.1 M Tris-HCl (pH 8.5) and 12% (w/v) PEG8000 |