6KR2
Crystal structure of Dengue virus nonstructural protein NS5 (form 1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U1 |
| Synchrotron site | SSRF |
| Beamline | BL17U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-05-14 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.9792 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 87.219, 146.418, 98.388 |
| Unit cell angles | 90.00, 105.80, 90.00 |
Refinement procedure
| Resolution | 44.818 - 3.060 |
| R-factor | 0.2268 |
| Rwork | 0.224 |
| R-free | 0.27490 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4k6m 4v0q |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.420 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10_2155: ???) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 60.000 | 60.000 | 3.170 |
| High resolution limit [Å] | 3.060 | 6.590 | 3.060 |
| Rmerge | 0.160 | 0.049 | 0.500 |
| Rmeas | 0.191 | 0.059 | 0.598 |
| Rpim | 0.103 | 0.032 | 0.325 |
| Total number of observations | 143708 | ||
| Number of reflections | 44340 | 4427 | 4431 |
| <I/σ(I)> | 4.7 | ||
| Completeness [%] | 98.3 | 96.4 | 99.1 |
| Redundancy | 3.2 | 3.2 | 3.2 |
| CC(1/2) | 0.997 | 0.781 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 283 | PEG2000 |
