Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KB2

X-ray structure of human PPARalpha ligand binding domain-Wy14643 co-crystals obtained by soaking

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-16
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.00000
Spacegroup nameP 1 21 1
Unit cell lengths45.164, 62.681, 53.667
Unit cell angles90.00, 105.56, 90.00
Refinement procedure
Resolution32.998 - 1.950
R-factor0.2066
Rwork0.205
R-free0.24400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3vi8
Data reduction softwareXDS
Data scaling softwareAimless (0.5.21)
Phasing softwarePHASER (2.7.16)
Refinement softwarePHENIX (1.11.1-2575-000)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.51043.5102.000
High resolution limit [Å]1.9508.9401.950
Rmerge0.0270.0110.344
Rmeas0.0330.0130.407
Rpim0.0170.0070.215
Number of reflections207672171462
<I/σ(I)>21.6813.1
Completeness [%]98.39498.3
Redundancy3.53.33.5
CC(1/2)1.0001.0000.944
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2770.1M HEPES (pH 7.0), 25%(w/v) PEG3350

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon