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6JVJ

Crystal structure of human MTH1 in complex with compound MI1006

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13B1
Synchrotron siteNSRRC
BeamlineBL13B1
Temperature [K]100
Detector technologyCCD
Collection date2018-10-02
DetectorRAYONIX MX300HE
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths59.017, 67.491, 79.258
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution22.708 - 2.297
R-factor0.1969
Rwork0.190
R-free0.25850
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.107
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.380
High resolution limit [Å]2.3004.9502.300
Rmerge0.0520.0360.157
Rmeas0.0590.0410.176
Rpim0.0270.0190.078
Total number of observations68401
Number of reflections1457015611425
<I/σ(I)>19.5
Completeness [%]99.398.5100
Redundancy4.74.34.9
CC(1/2)0.9980.985
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION3.7529830% PEG6000, 200 mM Lithium sulphate, 100 mM Sodium acetate pH 3.75

236060

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