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6JM4

The crystal structure of PB1 homo-dimer of human P62/SQSTM1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 11C
Synchrotron sitePAL/PLS
Beamline11C
Temperature [K]100
Detector technologyPIXEL
Collection date2018-03-28
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97943
Spacegroup nameC 1 2 1
Unit cell lengths112.483, 53.517, 61.457
Unit cell angles90.00, 94.29, 90.00
Refinement procedure
Resolution48.301 - 3.200
R-factor0.242593207011
Rwork0.239
R-free0.27620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2kkc
RMSD bond length0.002
RMSD bond angle0.487
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.3013.314
High resolution limit [Å]3.2003.200
Rmerge0.0810.262
Number of reflections5366
<I/σ(I)>10.54
Completeness [%]87.0
Redundancy1.1
CC(1/2)1.0001.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72911.8 M DL-Malic acid (pH 7.0), 0.1 M Tris-HCl (pH 7.0)

247947

PDB entries from 2026-01-21

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